Package index • SondePolishR

Run Shiny App

Function for running the interactive shiny app.

run_app(): Run the SondePolishR App

Reading and Loading Data

Functions for loading sonde data and metadata.

get_oow(): Convert field form data to out of water periods
get_precip(): Get hourly precipitation at data site
get_nldas(): Download NLDAS Hourly Precipitation
get_skip(): Guess the number of rows to skip to get correct headers
load_project(): Load and combine sonde project components
read_cal(): Read sonde calibration check file
read_ff(): Read sonde field form
read_sonde(): Upload raw sonde data

QA/QC Functions

Functions for tracking data quality and performing corrections.

add_flags(): Add new flag to dataset
apply_drift_shift(): Apply a drift correction to a parameter
apply_dup_edits(): Deals with duplicates in data and documents changes
apply_edit(): Log edits to a `sondeproj`
apply_interp(): Map interpolated data back to dataset
apply_smoothing(): Apply smoothing functions to data
correct_fdom(): Apply fDOM temperature and turbidity corrections
guess_shift(): Guess the amount to shift observations
identify_dups(): Identify duplicated observations with sonde data
identify_gaps(): Identify missing observations with sonde data
prep_interp(): Prepare interpolation dataset
run_interp(): Interpolate data gaps
shift_points(): Correct points via an absolute shift

Version Control Functions

Functions for tracking changes to data.

apply_diff(): Apply a diff object to a dataset
get_diff(): Track differences between sonde data
get_raw_data(): Get raw data from sonde project
write_log(): Write to Change Log

Data Export

Functions for plotting and exporting data.

describe_data(): Gets summary statistics for Sonde data
nice_yvar(): Reformats column names to be human readable
plot_sonde(): Create plotly object of requested sonde data
summarize_data(): Summarize data to a different time period

Example Data

Example datasets and metadata.

example_calcheck: Sample Calibration Check Data
example_data: Sample Sonde Data
example_fieldform: Sample Field Form
example_precip: Sample Precipitation Data
example_sondeproj: Sample Sonde Project